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Genome Archaeologists Uncover Origin Of Plant Hormone Auxin
Wednesday, 2018/04/11 | 08:13:27

Auxin is present in varying concentrations in plant cells and tissues. The speed of plant growth, especially at the top, development of lateral shoots and roots, leaves, flowers and fruits are set in motion by the hormone auxin. It's still a mystery how all these processes are made possible by this age-old molecule, and how such a complex system came about.

 

PhD candidate at Wageningen University and Research, Sumanth Mutte, studied the genome of over a thousand plant species. He selected species that are all still alive, but which have a different evolutionary life history. This includes the 'modern' flowering plants that split off 320 million years ago and which now have a highly complex auxin system, older seed plant types such as conifers, and spore plants such as ferns and the earlier mosses, which are over half a billion years old. The oldest form of life studied for auxin were single-cell, green algae, dating back to the deep past of a billion years ago.

 

Research leader Dolf Weijers said that of the three protein families that mediate auxin functions, one was already present in the green algae. Digging even deeper, a billion years ago, their research led to fragments of the three protein families. "We still find them in the plants of today, but they originate from green algae and probably had a different function at first," Professor Weijers added.

 

Postdoctoral researcher Hirotaka Kato subsequently conducted 'experimental genome archaeology' with plants from the three different eras: algae, mosses, and ferns. The researcher studied how these genomes respond to auxin, by determining the number of genes that are turned on or off by the hormone, for instance. "This shows us how the auxin system has become more complex, and which components plants can modify to use the hormone for new processes to regulate its growth and shape," explains Professor Weijers.

 

For more, read the press release from Wageningen.

 

Read more in the article: Sumanth K Mutte, Hirotaka Kato, Carl Rothfels, Michael Melkonian, Gane Ka-Shu Wong, Dolf Weijers. 2018. Origin and evolution of the nuclear auxin response system. RESEARCH ARTICLE Mar 27, 2018

Figure: Proteins in nuclear auxin pathway; mechanism and origin of the domains.

(A, B) Scheme of NAP in land plants. In the absence of auxin, Aux/IAA inhibit ARF via their PB1 domains, and by recruiting the TPL co-repressor. Auxin stabilizes the interaction between Aux/IAA and TIR1/AFB, followed by proteasome-mediated degradation of Aux/IAA. (C) Domain structure of NAP components in land plants and presence of each domain in algae, as recovered in transcriptomes. (Sub-)domains are indicated by colors, that match those in (B). ^: basal to all B3-type transcription factors in land plants, *: difficult to assign to ARF or Aux/IAA family; #: forming basal clade to both TIR1/AFB and COI1 in land plants.

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